All functions

auto_match_seqs()

Build a template table with automatically matched sequence names

concatipede()

Concatenate alignments

concatipede_example()

Get the path to one of concatipede example files

concatipede_prepare()

Load alignments and prepare template correspondence table for concatenate () function

find_fasta()

Find fasta files present in a folder

get_genbank_table()

Extract GenBank accession number from correspondence table

read_xl()

Read an Excel file

rename_sequences()

Rename sequences

write_fasta() write_nexus() write_phylip()

Writing alignments

write_xl()

Write an Excel file