This package allows to concatenate sequences from multiple Multiple Sequence Alignments based on a correspondence table.

How to install concatipede

For now you can install the package directly from Gitlab with:

# Run inside an R session
install.packages("devtools")
devtools::install_github("tardipede/concatipede")

Please let us know if you encounter any issues during the package installation!

How to use concatipede

You can get started with this example vignette.

Citation

Please cite this package as: Vecchi M. & Bruneaux M. (2021). concatipede: an R package to concatenate fasta sequences easily. http://doi.org/10.5281/zenodo.5130603